Bio Research

Connect to preclinical research tools and databases to accelerate early-stage life sciences R&D.

Bio Research consolidates 10 MCP server integrations and 6 analysis skills into a single package for life science researchers. Search biomedical literature via PubMed and preprint servers, access journal articles, explore drug target databases, and browse clinical trial registries — all from one plugin.

The plugin includes deep analysis workflows: run automated quality control on single-cell RNA-seq data, use scvi-tools for batch correction and cell type annotation, or launch nf-core bioinformatics pipelines for RNA-seq, variant calling, and ATAC-seq on local or public GEO/SRA data.

For translational work, generate FDA/NIH-compliant clinical trial protocols, convert lab instrument output files to Allotrope Simple Model format (supporting 40+ instrument types), and apply a systematic research problem selection framework.

Common workflows include literature review, single-cell analysis, sequencing pipelines, drug discovery research, and clinical trial design. Use commands like /start to see available tools and get oriented.

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