EDEN by Basecamp Research

Design antibiotics and prioritise vaccine targets against drug-resistant pathogens using EDEN, Basecamp Research's biological foundation model

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EDEN is Basecamp Research's frontier biological foundation model, trained on BaseData — the

world's largest biological dataset, encompassing over 10 billion novel genes from more than a million species collected across 200+ sampling expeditions in 30+ countries.

This connector gives Claude access to two EDEN capabilities:

Antibiotic design (EDEN-AMP): Generate novel antimicrobial peptide candidates with predicted

potency against 11 drug-resistant bacterial strains, including MRSA, Acinetobacter baumannii, and Pseudomonas aeruginosa. 97% of EDEN-designed AMPs are active in the lab; one candidate showed efficacy in mice comparable to last-resort antibiotics.

Vaccine target prioritisation (EDEN-Immunogenicity): Predict the probability that a protein-coding antigen will trigger an immune response, using EDEN embeddings with AUROC 0.85 on external validation data. Reduces weeks of empirical target selection to a single workflow. Every BaseData sequence is collected under informed-consent and benefit-sharing agreements, with each sequence traceable to country-specific collection permits. For research use only.

Tools

  • create_dataset_upload
  • delete_dataset
  • generate_antimicrobial_peptides
  • list_datasets
  • predict_immunogenicity
  • create_dataset_download

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