Owkin
Interact with AI agents built for biology
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The Owkin connector powers HistoPLUS, an AI agent that transforms H&E slides from the TCGA database into granular, queryable insights. Researchers can use it to quantify distinct cell types, analyze complex spatial tumor microenvironments, and validate hypotheses through cohort-level survival analysis. Use this connector to bridge the gap between raw biological data and actionable patient stratification, starting with histopathology.
You can use the Owkin connector to:
Refine Patient Stratification: "I'm looking for Lung Adenocarcinoma patients that might be resistant to immunotherapy. Are there cases with low immune infiltration in the TCGA cohort?"
Visualize Whole-Slide Images: "Find the slide most enriched in eosinophils from cohort TCGA_BRCA and plot it."
Assess Prognostic Value of H&E Based Markers: "Is the density of plasmocytes associated with overall survival in bladder carcinoma?"
Extract Quantitative Evidence for Reproducibility: "Export the breakdown of all cell types for patient TCGA-A2-A0YI-01Z-00-DX1 in parquet format, so I can reproduce this analysis."
Understand HistoPLUS Capabilities: "Can you provide an overview of the HistoPLUS model and its capabilities?